Ligand: RYA

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 6VZHD
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CK1 VRK1 VRK1_HUMAN 6VZHB Q99986 23 341 396.0 RYA:404 Type1.5_Back Inactive DFGin 8.3441 14.206 BLAminus -120.79, -166.8 56.33, 59.14 -80.8, 7.94 300.87, 73.38 -47.26, -36.59 in-in in 7.7281 Saltbr-in 2.9946 HRD-in -92.77, -55.9 80.23, -2.19 in-in-out SNCiio in-out ActLoopNT-in 2.9217 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oioi APE10-dihe-na -67.94, 152.72 APE9-dihe-na 97.86, -161.39 APE8-dihe-in -95.4, 124.26 APE8-rot-in 302.76 APE67-dihe-in -65.98, -28.39 -56.72, -47.18 APE12-dist-out 15.224 APE11-dist-in 13.8834 APE10-dist-out 8.1061 APE9-dist-in 4.1192 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.55 0.217 0.251 B 364.0 301.0 18 35 35 0 [[37, 326]] 1.0 6vzh CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 6VZHD Q99986 22 341 396.0 RYA:404 Type1.5_Back Inactive DFGin 8.2467 14.6179 BLAminus -109.24, -177.4 58.04, 66.78 -86.29, 48.33 296.8, 67.41 -65.77, -39.54 in-in in 7.9394 Saltbr-in 2.8144 HRD-in -86.23, -60.59 80.89, 1.45 in-in-out SNCiio in-out ActLoopNT-in 2.9342 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oiii APE10-dihe-na -65.14, 150.01 APE9-dihe-na 97.56, -161.15 APE8-dihe-in -96.29, 124.58 APE8-rot-in 304.06 APE67-dihe-in -65.24, -28.05 -59.24, -46.64 APE12-dist-out 14.7447 APE11-dist-in 13.3305 APE10-dist-in 7.5453 APE9-dist-in 4.1609 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.55 0.217 0.251 D 364.0 311.0 9 35 35 0 [[37, 326]] 1.0 6vzh CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1

Ligand: RYA

Total number of chains: 2
Active chains: 0
Total number of genes: 1
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 6VZHD
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
CK1 VRK1 VRK1_HUMAN 6VZHB Q99986 23 341 396.0 RYA:404 Type1.5_Back Inactive DFGin 8.3441 14.206 BLAminus -120.79, -166.8 56.33, 59.14 -80.8, 7.94 300.87, 73.38 -47.26, -36.59 in-in in 7.7281 Saltbr-in 2.9946 HRD-in -92.77, -55.9 80.23, -2.19 in-in-out SNCiio in-out ActLoopNT-in 2.9217 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oioi APE10-dihe-na -67.94, 152.72 APE9-dihe-na 97.86, -161.39 APE8-dihe-in -95.4, 124.26 APE8-rot-in 302.76 APE67-dihe-in -65.98, -28.39 -56.72, -47.18 APE12-dist-out 15.224 APE11-dist-in 13.8834 APE10-dist-out 8.1061 APE9-dist-in 4.1192 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.55 0.217 0.251 B 364.0 301.0 18 35 35 0 [[37, 326]] 1.0 6vzh Homo sapiens CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1
CK1 VRK1 VRK1_HUMAN 6VZHD Q99986 22 341 396.0 RYA:404 Type1.5_Back Inactive DFGin 8.2467 14.6179 BLAminus -109.24, -177.4 58.04, 66.78 -86.29, 48.33 296.8, 67.41 -65.77, -39.54 in-in in 7.9394 Saltbr-in 2.8144 HRD-in -86.23, -60.59 80.89, 1.45 in-in-out SNCiio in-out ActLoopNT-in 2.9342 ActLoopCT-out nonTYR APEdihe_aaiii APEdist_oiii APE10-dihe-na -65.14, 150.01 APE9-dihe-na 97.56, -161.15 APE8-dihe-in -96.29, 124.58 APE8-rot-in 304.06 APE67-dihe-in -65.24, -28.05 -59.24, -46.64 APE12-dist-out 14.7447 APE11-dist-in 13.3305 APE10-dist-in 7.5453 APE9-dist-in 4.1609 K34A,K35A,E36A,E212A,K214A,E215A,E292A,K293A,K295A,K359A,K360A None None XRAY 2.55 0.217 0.251 D 364.0 311.0 9 35 35 0 [[37, 326]] 1.0 6vzh Homo sapiens CK1_VRK1_HUMAN CK1 8.4e-105 355.8 1.0 261.0 261.0 196 197 198 200 202 71 83 87 174 176 175 177.0 243 231 226 225 224 223 222 221 220 132 Serine/threonine-protein kinase VRK1

Ligand: RYA

Total number of chains: 0
Active chains: 0
Total number of genes: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Group Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name