CK1_VRK3 (Serine/threonine-protein kinase VRK3)

Total number of chains: 2
Active chains: 0
Uniprot: VRK3_HUMAN
Kinase Domain Residues: 166 - 455
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 2JIIB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Gene PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
VRK3 2JIIA Q8IV63 141 472 474.0 No_ligand No_ligand Pseudo DFGin 8.058 13.4479 BLAminus -126.84, -158.76 59.27, 60.76 -88.16, 20.44 296.11, 92.21 -53.1, -27.84 in-in in 8.0769 Saltbr-in 2.7057 HRD-in -67.98, -48.21 89.48, -15.23 in-in-in SNCiii in-in ActLoopNT-in 2.8287 ActLoopCT-in nonTYR APEdihe_aaiai APEdist_iiii APE10-dihe-na -72.85, 117.18 APE9-dihe-na 111.48, -175.87 APE8-dihe-in -67.32, 115.98 APE8-rot-na 192.14 APE67-dihe-in -71.31, -23.63 -54.42, -32.09 APE12-dist-in 13.8537 APE11-dist-in 12.4242 APE10-dist-in 6.6904 APE9-dist-in 4.861 None None None XRAY 2.0 0.181 0.223 A 352.0 321.0 11 35 35 0 [[166, 455]] 1.0 2jii CK1_VRK3_HUMAN CK1 4.8e-96 327.1 1.0 261.0 261.0 325 326 327 329 331 203 214 218 303 305 304 306.0 372 360 355 354 353 352 351 350 349 260 Serine/threonine-protein kinase VRK3
VRK3 2JIIB Q8IV63 138 472 474.0 No_ligand No_ligand Pseudo DFGin 7.9722 13.6201 BLAminus -126.23, -160.08 62.29, 57.97 -88.31, 21.29 296.85, 92.8 -56.12, -25.41 in-in in 8.2041 Saltbr-in 2.7376 HRD-in -68.53, -45.66 90.53, -18.15 in-in-in SNCiii in-in ActLoopNT-in 2.8715 ActLoopCT-in nonTYR APEdihe_aaiai APEdist_iiii APE10-dihe-na -73.7, 114.01 APE9-dihe-na 113.19, -176.53 APE8-dihe-in -66.63, 117.55 APE8-rot-na 191.52 APE67-dihe-in -72.55, -20.81 -57.04, -32.6 APE12-dist-in 13.8597 APE11-dist-in 12.3676 APE10-dist-in 6.6242 APE9-dist-in 4.9736 None None None XRAY 2.0 0.181 0.223 B 352.0 325.0 10 35 35 0 [[166, 455]] 1.0 2jii CK1_VRK3_HUMAN CK1 4.8e-96 327.1 1.0 261.0 261.0 325 326 327 329 331 203 214 218 303 305 304 306.0 372 360 355 354 353 352 351 350 349 260 Serine/threonine-protein kinase VRK3

CK1_VRK3 (Serine/threonine-protein kinase VRK3)

Total number of chains: 2
Active chains: 0
Spatial label Dihedral label Number of Chains Percent Representative
DFGin BLAminus 2 100.0% 2JIIB
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name
VRK3 VRK3_HUMAN 2JIIA Q8IV63 141 472 474.0 No_ligand No_ligand Pseudo DFGin 8.058 13.4479 BLAminus -126.84, -158.76 59.27, 60.76 -88.16, 20.44 296.11, 92.21 -53.1, -27.84 in-in in 8.0769 Saltbr-in 2.7057 HRD-in -67.98, -48.21 89.48, -15.23 in-in-in SNCiii in-in ActLoopNT-in 2.8287 ActLoopCT-in nonTYR APEdihe_aaiai APEdist_iiii APE10-dihe-na -72.85, 117.18 APE9-dihe-na 111.48, -175.87 APE8-dihe-in -67.32, 115.98 APE8-rot-na 192.14 APE67-dihe-in -71.31, -23.63 -54.42, -32.09 APE12-dist-in 13.8537 APE11-dist-in 12.4242 APE10-dist-in 6.6904 APE9-dist-in 4.861 None None None XRAY 2.0 0.181 0.223 A 352.0 321.0 11 35 35 0 [[166, 455]] 1.0 2jii Homo sapiens CK1_VRK3_HUMAN CK1 4.8e-96 327.1 1.0 261.0 261.0 325 326 327 329 331 203 214 218 303 305 304 306.0 372 360 355 354 353 352 351 350 349 260 Serine/threonine-protein kinase VRK3
VRK3 VRK3_HUMAN 2JIIB Q8IV63 138 472 474.0 No_ligand No_ligand Pseudo DFGin 7.9722 13.6201 BLAminus -126.23, -160.08 62.29, 57.97 -88.31, 21.29 296.85, 92.8 -56.12, -25.41 in-in in 8.2041 Saltbr-in 2.7376 HRD-in -68.53, -45.66 90.53, -18.15 in-in-in SNCiii in-in ActLoopNT-in 2.8715 ActLoopCT-in nonTYR APEdihe_aaiai APEdist_iiii APE10-dihe-na -73.7, 114.01 APE9-dihe-na 113.19, -176.53 APE8-dihe-in -66.63, 117.55 APE8-rot-na 191.52 APE67-dihe-in -72.55, -20.81 -57.04, -32.6 APE12-dist-in 13.8597 APE11-dist-in 12.3676 APE10-dist-in 6.6242 APE9-dist-in 4.9736 None None None XRAY 2.0 0.181 0.223 B 352.0 325.0 10 35 35 0 [[166, 455]] 1.0 2jii Homo sapiens CK1_VRK3_HUMAN CK1 4.8e-96 327.1 1.0 261.0 261.0 325 326 327 329 331 203 214 218 303 305 304 306.0 372 360 355 354 353 352 351 350 349 260 Serine/threonine-protein kinase VRK3

CK1_VRK3 (Serine/threonine-protein kinase VRK3)

Total number of chains: 0
Active chains: 0
Spatial label Dihedral label Number of Chains Percent Representative
All chains
Pymol session (all) Pymol script (all)
Representatives
Pymol session (repr) Pymol script (repr)
All chains - renumbered by
Uniprot PDB Alignment
Hover over column headers for tooltip help.

Gene SwissprotID PDB UniprotID First_obs_res Last_obs_res Length_Unp Ligand Ligand_type Activity_label Spatial_label Phe_Glu4_dis Phe_Lys_dis Dihedral_label XDFG
φ,ψ		 DFG-Asp
φ,ψ		 DFG-Phe
φ,ψ		 DFG-Phe
χ1,χ2		 DFG-Gly
φ,ψ		 ChelixSaltbr_label Chelix_label Lys_Glu_dis Saltbr_label LysNZ_GluOE_dis HRD_label His φ,ψ Arg φ,ψ SNC_label SNCpymol_label ActLoop_label ActLoopNT_label DFG6_XHRD_dis ActLoopCT_label APEtype APEdihe_label APEdist_label APE10_dihe_label APE10 φ,ψ APE9_dihe_label APE9 φ,ψ APE8_dihe_label APE8 φ,ψ APE8_rotamer_label APE8 χ1 APE67_label APE6 φ,ψ APE7 φ,ψ APE12_dist_label APE12_DFG4_dis APE11_dist_label APE11_DFG4_dis APE10_dist_label APE10_DFG4_dis APE9_dist_label APE9_Arg_dis Chain_mut Chain_phos Modified_aa Method Resolution Rvalue FreeRvalue Chain_id ChainLen Ordered_residues DomainBreak ActLoopLength ActLoopResolvedResidues ActLoopDisorderedResidues Kinase_domains_Unp N_Kinase_domains_Unp pdb Species Kincore_name hmm Evalue Score hmmbeg hmmend hmmlen XDFGnum DFGnum PHEnum DFG4num DFG6num LYSnum GLUnum GLU4num XHRDnum ARGnum HRDnum HRDaspnum aFaspnum APEnum APE6num APE7num APE8num APE9num APE10num APE11num APE12num Hinge1num Protein_name